# Documentation Index (all formats) — Gnomad Desktop Assistant

Every document is available in **three formats** (where exported):

| Format | Best for |
|--------|----------|
| **`.md`** | GitHub, editing, version control |
| **`.html`** | Browser reading (styled, TOC sidebar) |
| **`.txt`** | Notepad, Word, email, print |

**Live site:** [davidthegnomad.github.io/gnomad-desktop-assistant](https://davidthegnomad.github.io/gnomad-desktop-assistant/) (landing page + links below)

Regenerate HTML/TXT after editing Markdown:

```bash
npm run docs:export
```

---

## Workspace (ORGANIZATION meta repo)

| Resource | Link |
|----------|------|
| ORG_Docs index | [ORG_Docs/README.md](../../../ORG_Docs/README.md) |
| Workspace map | [WORKSPACE.md](../../../ORG_Docs/maps/WORKSPACE.md) |
| Project catalog | [PROJECT_CATALOG.md](../../../ORG_Docs/maps/PROJECT_CATALOG.md) |
| This project's links | [WORKSPACE_LINKS.md](../WORKSPACE_LINKS.md) |

---

## Start here

| Document | MD | HTML | TXT |
|----------|----|------|-----|
| **Project landing** | — | [index.html](index.html) | — |
| README (project overview) | [../README.md](../README.md) | [../README.html](../README.html) | [../README.txt](../README.txt) |
| **User Guide** | [USER_GUIDE.md](USER_GUIDE.md) | [USER_GUIDE.html](USER_GUIDE.html) | [USER_GUIDE.txt](USER_GUIDE.txt) |
| Changelog | [../CHANGELOG.md](../CHANGELOG.md) | [../CHANGELOG.html](../CHANGELOG.html) | [../CHANGELOG.txt](../CHANGELOG.txt) |

---

## Engineering & portfolio

| Document | MD | HTML | TXT |
|----------|----|------|-----|
| Tech Stack | [TECH_STACK.md](TECH_STACK.md) | [TECH_STACK.html](TECH_STACK.html) | [TECH_STACK.txt](TECH_STACK.txt) |
| Build Narrative | [BUILD.md](BUILD.md) | [BUILD.html](BUILD.html) | [BUILD.txt](BUILD.txt) |
| Architecture | [ARCHITECTURE.md](ARCHITECTURE.md) | [ARCHITECTURE.html](ARCHITECTURE.html) | [ARCHITECTURE.txt](ARCHITECTURE.txt) |
| Security Model | [SECURITY_MODEL.md](SECURITY_MODEL.md) | [SECURITY_MODEL.html](SECURITY_MODEL.html) | [SECURITY_MODEL.txt](SECURITY_MODEL.txt) |
| Privacy | [PRIVACY.md](PRIVACY.md) | [PRIVACY.html](PRIVACY.html) | [PRIVACY.txt](PRIVACY.txt) |
| Roadmap | [ROADMAP.md](ROADMAP.md) | [ROADMAP.html](ROADMAP.html) | [ROADMAP.txt](ROADMAP.txt) |
| Wave B (HITL, GGUF, xterm, sandbox) | [WAVE_B_ROADMAP.md](WAVE_B_ROADMAP.md) | [WAVE_B_ROADMAP.html](WAVE_B_ROADMAP.html) | [WAVE_B_ROADMAP.txt](WAVE_B_ROADMAP.txt) |
| Auto-updater setup | [UPDATER.md](UPDATER.md) | [UPDATER.html](UPDATER.html) | [UPDATER.txt](UPDATER.txt) |
| Release runbook | [RELEASE_RUNBOOK.md](RELEASE_RUNBOOK.md) | [RELEASE_RUNBOOK.html](RELEASE_RUNBOOK.html) | [RELEASE_RUNBOOK.txt](RELEASE_RUNBOOK.txt) |
| Troubleshooting | [TROUBLESHOOTING.md](TROUBLESHOOTING.md) | [TROUBLESHOOTING.html](TROUBLESHOOTING.html) | [TROUBLESHOOTING.txt](TROUBLESHOOTING.txt) |
| Accessibility | [ACCESSIBILITY.md](ACCESSIBILITY.md) | [ACCESSIBILITY.html](ACCESSIBILITY.html) | [ACCESSIBILITY.txt](ACCESSIBILITY.txt) |
| Accessibility statement | [ACCESSIBILITY_STATEMENT.md](ACCESSIBILITY_STATEMENT.md) | [ACCESSIBILITY_STATEMENT.html](ACCESSIBILITY_STATEMENT.html) | [ACCESSIBILITY_STATEMENT.txt](ACCESSIBILITY_STATEMENT.txt) |
| Security review | [SECURITY_REVIEW.md](SECURITY_REVIEW.md) | [SECURITY_REVIEW.html](SECURITY_REVIEW.html) | [SECURITY_REVIEW.txt](SECURITY_REVIEW.txt) |
| Enterprise deployment | [ENTERPRISE.md](ENTERPRISE.md) | [ENTERPRISE.html](ENTERPRISE.html) | [ENTERPRISE.txt](ENTERPRISE.txt) |
| GGUF setup | [GGUF_SETUP.md](GGUF_SETUP.md) | [GGUF_SETUP.html](GGUF_SETUP.html) | [GGUF_SETUP.txt](GGUF_SETUP.txt) |
| macOS notarization | [MACOS_NOTARIZATION.md](MACOS_NOTARIZATION.md) | [MACOS_NOTARIZATION.html](MACOS_NOTARIZATION.html) | [MACOS_NOTARIZATION.txt](MACOS_NOTARIZATION.txt) |
| Test strategy | [TEST_STRATEGY.md](TEST_STRATEGY.md) | [TEST_STRATEGY.html](TEST_STRATEGY.html) | [TEST_STRATEGY.txt](TEST_STRATEGY.txt) |
| Demo Script | [DEMO_SCRIPT.md](DEMO_SCRIPT.md) | [DEMO_SCRIPT.html](DEMO_SCRIPT.html) | [DEMO_SCRIPT.txt](DEMO_SCRIPT.txt) |
| QA Checklists | [QA_CHECKLIST.md](QA_CHECKLIST.md) | [QA_CHECKLIST.html](QA_CHECKLIST.html) | [QA_CHECKLIST.txt](QA_CHECKLIST.txt) |
| Cross-platform dev checklist | [CROSS_PLATFORM_CHECKLIST.md](CROSS_PLATFORM_CHECKLIST.md) | [CROSS_PLATFORM_CHECKLIST.html](CROSS_PLATFORM_CHECKLIST.html) | [CROSS_PLATFORM_CHECKLIST.txt](CROSS_PLATFORM_CHECKLIST.txt) |

---

## Build & platform

| Document | MD | HTML | TXT |
|----------|----|------|-----|
| Build Platforms | [BUILD_PLATFORMS.md](BUILD_PLATFORMS.md) | [BUILD_PLATFORMS.html](BUILD_PLATFORMS.html) | [BUILD_PLATFORMS.txt](BUILD_PLATFORMS.txt) |
| Linux Packages | [LINUX_PACKAGES.md](LINUX_PACKAGES.md) | [LINUX_PACKAGES.html](LINUX_PACKAGES.html) | [LINUX_PACKAGES.txt](LINUX_PACKAGES.txt) |
| Flatpak | [FLATPAK.md](FLATPAK.md) | [FLATPAK.html](FLATPAK.html) | [FLATPAK.txt](FLATPAK.txt) |
| Snap | [SNAP.md](SNAP.md) | [SNAP.html](SNAP.html) | [SNAP.txt](SNAP.txt) |
| macOS Permissions | [MACOS_PERMISSIONS.md](MACOS_PERMISSIONS.md) | [MACOS_PERMISSIONS.html](MACOS_PERMISSIONS.html) | [MACOS_PERMISSIONS.txt](MACOS_PERMISSIONS.txt) |

---

## Product & design

| Document | MD | HTML | TXT |
|----------|----|------|-----|
| Knowledge Base | [KNOWLEDGE.md](KNOWLEDGE.md) | [KNOWLEDGE.html](KNOWLEDGE.html) | [KNOWLEDGE.txt](KNOWLEDGE.txt) |
| UI Design | [UI_DESIGN.md](UI_DESIGN.md) | [UI_DESIGN.html](UI_DESIGN.html) | [UI_DESIGN.txt](UI_DESIGN.txt) |
| Agent Capabilities | [AGENT_CAPABILITIES_PROPOSAL.md](AGENT_CAPABILITIES_PROPOSAL.md) | [AGENT_CAPABILITIES_PROPOSAL.html](AGENT_CAPABILITIES_PROPOSAL.html) | [AGENT_CAPABILITIES_PROPOSAL.txt](AGENT_CAPABILITIES_PROPOSAL.txt) |

---

## Internal / review

| Document | MD | HTML | TXT |
|----------|----|------|-----|
| Code Review | [CODE_REVIEW.md](CODE_REVIEW.md) | [CODE_REVIEW.html](CODE_REVIEW.html) | [CODE_REVIEW.txt](CODE_REVIEW.txt) |
| Test Notes | [TEST_NOTES.md](TEST_NOTES.md) | [TEST_NOTES.html](TEST_NOTES.html) | [TEST_NOTES.txt](TEST_NOTES.txt) |
| Recommended Docs | [RECOMMENDED_DOCS.md](RECOMMENDED_DOCS.md) | [RECOMMENDED_DOCS.html](RECOMMENDED_DOCS.html) | [RECOMMENDED_DOCS.txt](RECOMMENDED_DOCS.txt) |

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